CDS
| Accession Number | TCMCG051C02759 |
| gbkey | CDS |
| Protein Id | XP_024449407.1 |
| Location | complement(join(20779549..20779942,20780433..20780962,20781699..20782470,20783271..20783341,20783422..20783486,20783858..20786915,20786998..20787060,20787228..20787296,20789659..20789697,20791126..20791229,20791341..20791421,20791507..20791563,20791817..20791952,20792580..20792641,20792729..20792853,20792960..20793048,20793138..20793218,20793306..20793413,20793496..20793576,20793780..20793839)) |
| Gene | LOC18094897 |
| GeneID | 18094897 |
| Organism | Populus trichocarpa |
Protein
| Length | 2014aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA17973 |
| db_source | XM_024593639.1 |
| Definition | protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X4 [Populus trichocarpa] |
EGGNOG-MAPPER Annotation
| COG_category | KL |
| Description | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11320
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGGCGTCGAAAGGCCCAAGGTCTAAGCTTGATCACGAGACCAGAGCTCGGCGTCAAAAGGCACTGGAAGCTCCGAGGGAGCCGCGTCGCCCTAAGACTCACTGGGATCACGTCTTAGAGGAAATGGTTTGGTTGTCGAAGGACTTTGAGTCGGAGAGGAAATGGAAATTGGCACAAGCGAAGAAAGTGGCATTAAGAGCCAGTAAGGGCATGTTGGATCAGGCCACCAGAGGAGAGAAGAAACTGAAGGAAGAGGAGCAGCGGCTGCGAAAAGTTGCTCTTAATATTTCAAAGGATGTAAAGAAATTCTGGGTTAAAATAGAAAAGCTGGTACTTTACAAGCATCAGATGGAGCTTGATGAGAAGAAGAAAAAGGCACTTGATAAGCAGCTTGAGTTTCTTCTAGGACAAACTGAGAGGTACTCTACAATGTTAGCAGAAAATCTAGTGGACAAACCATCAGAGCAATATGCTGCACAAGATAAACCGAGAATTGCATACAAGAAAGGAGATGATGCTAATATACCTGAGCAAGTCAATGATGAGCCTCAGTTGGACACTACAGACAATGACGATGAGTATGATGTGCAATCTGAAGATGAAGTGGAAGATGATGAGCATACTATTGAGGAAGATGAGGCTCTTATAACTGCAGAAGAAAGGCAAGAAGAATTGGAAGCTCTGCACAATGAAACAGATATTCCACTCGAGGAGCTACTTAACCGTTATCCTGTAGAGAAAGGTAGCGGAGAAAGTAGTGAAAATGGAGCTAAGCCATCTGCAAATGGGGAAGACCATTGGAAAGGAAACGATATGTCTGCTGCTAGTGACATGGAGATAAGCTGCTCACCTGTTAATGCTAGTCGTCGTTGTGTAAGTTACAATGACTTATTGGAAATCAGGACCAATGAAACCAGAAATCAGTTAAGTATTTCTGATGATCCGGCCAAAGAACGTGTGCCATATGATTTCAGTGATGAACAGGAAGATGGTGATTTTGATCTTGCTGCAGAAGAAGAAAAGGATGACGAGACAACCTTGTTGGAAGAGGAAGAGCTGGCAAAAGCAGATTCAAAGAATCCCATAGATGAGATCTCATTGCTGCAAAAGGAGAGTGAAATCCCTTTGGAAGAATTGCTTGCAAGGTATACCAAGGAGCCTAACAATGAAGTTTCAGAGGATGAATCTGAATATGCATCTTTATTATCAGACAATGTGTCAAATTCCCCAGGCCATGAAGATGAACTGAAGCAGCTGGATAACTCAATGGATGGAATTGTTGAATGTGGAAACCATCCTCTTGTAGAAGAACAAGAAAAGGGAAATGAAAAAATTTCAGAAGATGGAAGGGAGAGTGAGAATAGGATTGCTGATGCTGCTGCTGCTGCAAGATCTGCACAACCAACAGGCAATACATTCTCAACAACTAAAGTGCGCACGAAGTTCCCTTTTCTTCTTAAGTACCCTCTTCGTGAATATCAACATATAGGCCTTGATTGGCTTGTTACAATGTATGAGAAAAGATTAAATGGGATTCTAGCTGATGAAATGGGGCTTGGAAAGACAATCATGACTATTGCTTTGCTTGCACACCTGGCATGTGAAAAGGGAATATGGGGTCCTCATCTGATCGTGGTTCCCACAAGTGTCATGCTTAACTGGGAAACAGAGTTTTTTAAATGGTGTCCTGCCTTCAAGATTTTAACATATTTTGGCAGTGCAAAAGAGCGTAAATGCAAGAGGCAAGGTTGGCTGAAACCGAACTCCTTCCATGTATGCATAACAACTTACAGACTGGTTATACAGGATTCCAAAGTCTTCAAAAGGAAGAAATGGAAGTATTTGATATTGGATGAAGCTCATCTGATTAAAAATTGGAAGTCTCAGAGATGGCAAACTCTTTTAAACTTTAATTCAAAACGACGAATCTTATTAACTGGTACACCTCTGCAGAATGATCTCATGGAACTCTGGTCACTGATGCATTTCTTGATGCCCCACATCTTTCAATCTCACCAGGAATTCAAGGACTGGTTTAGCAATCCAATAACTGGGATGGTGGAGGGACAAGAAAGAGTGAACAAAGAAGTTGTTGATCGTTTGCATAATGTTCTCCGTCCATTCATCCTCCGTCGATTGAAAAGGGATGTGGAGAAGCAGCTGCCCATGAAACATGAGCATGTCATCTATTGTAGACTTTCAAGGAGGCAGCGTAACTTGTACGAGGATTTCATTGCTAGCTCAGAGACACAAGCTACCCTTGCCACTGCCAACTTTTTTGGGATGATCAGTATCATAATGCAACTTCGTAAAGTTTGTAACCATCCTGACTTATTTGAGGGTCGTCCAATTATTAGTTCTTTTGATATGGCTGGTATAGACATGCAATTAAGTAGTTCTGTTTGTTCAATGCTTTCACCTGGGCCATTGTCATCAGTAGATCTTTGTGCTTTGGGGCTTATATTTACTCATCTTGATTTTAGCATGGCCTCTTGGGAGTACGATGAAGTAAAGTCTATTGCAACTCCATCAAGATTAATTAAGGAGCGTTCCAACCTGGATAACATAGAAGAAGTTGGACCGGGATCTAAACATTGGAAGAAGTTGCCTGGAAAAAATATTTTTGAAGAGATTAGAAAGTCATTATTGGAGGAGAGATTAAGAGAAGTGAAGCAACGGGCAGCATCTATTGCATGGTGGAATTCCTTGAGGTGTCAGAAAAAACCCATATACTCAACAACCCTACGAGAACTTCTCACAGTGAAGCATCCCATCTATGATGTCCATCGCCATAAAACTGAGCGACTCTCTTACTTGTACTCTTCTAAGCTGGGTGATGTTATTCTTTCACCAATTGAACGGTTCCAGAAGATGACTGATCTTGTGGAATCATTTATGTTTGCAATTCCAGCAGCACGTACCCCAGTACCTGTCTTCTGGTGTAGTCAGATTAGAACTCCAGTGTTTCTTCATTCAACTTATGAGGAGAAATGCTCTGAAATGTTGTTACCTCTTCTTTCACCTATCAGACCTGCAATTGTTCGGAGACAACTTTATTTTCCAGACAGGCGTCTAATACAGTTTGACTGTGGTAAATTGCAGGAGCTTGCAATTTTGCTCAGGAAGTTGAAGTCAGAAGGACACCGGGTATTAATATTCACACAGATGACTAAGATGCTTGATATTTTGGAGGTTTTCATGAATTTGTATGGCTACACTTACATGCGCTTAGATGGATCCACTCAACCAGAGGAGAGACAAACATTAATGCAGCGTTTCAACACAAATCCCAAAATCTTTATCTTCATTTTATCAACCCGTAGTGGAGGTGTTGGCATCAATCTTGTAGGGGCAGATACTGTAATCTTCTATGATAGTGACTGGAATCCTGCTATGGATCAACAGGCCCAAGACCGCTGCCATCGGATAGGACAGACACGTGAAGTACATATCTACAGGTTAATCAGTGAGAGCACCATTGAAGAAAACATTTTAAAGAAAGCCAATCAGAAGCGTGCTCTTGATGATCTAGTAATACAGAGTGGAGGGTACAATACGGAATTTTTCAAGAAGCTCAATCCTATGGAATTATTCTCAGGGCATAAAACACTTCAGATTAAGAATATGCAGAGGGAGAAAAACCATAACAATGGAAACGAGGTGTCTTTGTCTAATGCAGATGTGGATGCTGCTCTGAAATATGCAGAAGATGAAGCAGATTACATGGCATTGAAGAAAGTCGAACAGGAAGAGGCTGTAGACAACCAAGAGTTTACTGAAGAGGCCATTGGGAGATTGGAAGATGATGAATTTGTGAATGATGATGATATGAAGGCTGATGAGCCTACAGACCATGAGATGACAACTTATAGTAAAGATGGTGCAGTGAATTTAAAAGAGAATGGTTGCATTGAAGAGAGAGCTGTAACTCTTACTGGCAATGAAGATGTTGATATGTTGGCTGATGTCAAACAGATGGCGGCGGCGGCGGCTGCTGCTGGACAAGCTATCTCATCCTTTGAGAATCAGCTACGTCCAATTGACAGATATGCGGTTCGGTTTCTGGAATTGTGGGATCCAATTATAGACAAAGCAGCCTTGGAATCTCAAGTTGGGTTTGAGGAGACCGAATGGGAGCTTGATCGTATTGAGAAGTACAAGGAGGAAATGGAAGCTGAGATTGATGATGATGAGGAACCATTGGTTTATGAAAGATGGGATGCTGATTTTGCGACTGAGGCATACCGACAAGAAGTTGAGGCATTAACTCAACATCAGCTGTTGGAAGAACAGGAAGCTGAAGCTAATGAGAAGGAAGGTGCAGATGATGGACATTTAGATGCTATGGTGTATAAAATGCCACGTAATCCTAAATTGAAGTCTAAGAAGAAACCAAAGAAAGCCAAGTTCAAATCTCTGAAGAAAGAATCTTTGACTTCTGAATTGAAACACGTGAAAGAGGAGGTATCAATGGAAACTTTGTCTGTAGATGATGATGATGATGGTACATATTCGGATACGATGTCTCCTTGTTCCAGTATGTGGAGAAAGCGTAAGAAAGCAGAATCAGCAATTTGTATTGACAAAACGAGGTCGAAGAAGACTAAGAAATTCAAAAAGGGTCCAGAAACGTGCACTTTTAGTGTAGATTCAGACCTGTCTGGAAAGCAGCATGACAGATTTACGGAACTAAAACCATATGAGGTTGTGGTTTCCGATATTGAGCAGAAGCCAGCTAGCAGGAGCAAAATGGGAGGGAAAATATCCATCAGTACCATGCCAGTGAAACGGGTTTTGATGATAAAGCCAGAGAAGTTGAAGAAGGGGAATGTTTGGTTGAAAGATTGTGTTCCACCACCTGCTTTATGGATGCCACAGGAGGATGCAGTATTATGTGCTGTTGTACATGAATATGGTCCACATTGGAGCTTGGTCAGTGAAATTCTGTATGGGATGACTGCTGGTGGGTTTTATCGGGGAAGATACCGCCATCCAGTTCATTGTTGTGAGAGATTTAGGGAGCTAATCCACAGATATGTTTTATTTTCTCCGGAAAATCCTATTAATAATGAAAAGATGAGCAACATGGTCCCTGGGAAGGCCCTTCTGAAAGTAACCGAGGATAACATACGGATGTTGTTAAATGTTGTTGCTGAGCAGCCAGACCATGAGTTACTTCTCCAGAAGCACTTCACAGCACTGCTTTCTTCTGTGTGGAGGGTGAAATCTCGTGTTGAAAATCAACAAAACATGCCATCATCTCGAAATGCCCTTTATAACAGTGGAAGGGTTTTCAATTCTTCTGTTAATCCGTTACCTTGGAACTCCTTGAGGGAATCGGCAAAAAGAATGAAATTCACTAATTTGGGACAGAGTACCAAGTTGCTGGCAGCTGCACTCCATGATGCCAGCAGTAGAAGGCCAGGTGATAGAGTTTCCAATTCCAATGTGAATGAAGAAGCTCCTGCTGTAGGCGAGAAGCTGGAAATAACATTGGAATTCCAAAAGGAGGAAAATGATTATTTGATTCCATTCCCACCTGTAATAAGTTTGTCAATACCTGGCTCAGCACCATGGATGTCTGTAAATAAGGATAGAGCGGCGGCTCACCATCTCAGGGCATCCACAAGCATAGCTGAAAATCGATTCAGGGATGCAGCAAGAGCTTCTTCATCTGTGTTACCAGCAAATGATTTGAAGTTGTGGCTGGCTTCAAAGACTCAGTCCTTGGGAAAGCACAAGCTAACTGTCTCTGAGTCAACCAAGCCTCCTAGGTCAAAGACGAGGAAAACTTTGCTGGAGCAAAATGAAGGACATGCCGAGCCAGTAATGCAACCACTGTCAGATAGGGATCCCAATTTAAGGTTTGACCTGCCACCAGAAGTCATTCAGGATGATAAGGATGGGTTTTCTATTTCATTCATGGAAAAAGAACTTTCAGTGGAAACGAAGATCTCCGAAGCTGTCCCGCATATCTATGTTCCTGATTTGATATTGGGTCTTGATGATTATTCTTTGTTGCCGGAATACACTGACATTGGATAG |
| Protein: MASKGPRSKLDHETRARRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMLDQATRGEKKLKEEEQRLRKVALNISKDVKKFWVKIEKLVLYKHQMELDEKKKKALDKQLEFLLGQTERYSTMLAENLVDKPSEQYAAQDKPRIAYKKGDDANIPEQVNDEPQLDTTDNDDEYDVQSEDEVEDDEHTIEEDEALITAEERQEELEALHNETDIPLEELLNRYPVEKGSGESSENGAKPSANGEDHWKGNDMSAASDMEISCSPVNASRRCVSYNDLLEIRTNETRNQLSISDDPAKERVPYDFSDEQEDGDFDLAAEEEKDDETTLLEEEELAKADSKNPIDEISLLQKESEIPLEELLARYTKEPNNEVSEDESEYASLLSDNVSNSPGHEDELKQLDNSMDGIVECGNHPLVEEQEKGNEKISEDGRESENRIADAAAAARSAQPTGNTFSTTKVRTKFPFLLKYPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFFKWCPAFKILTYFGSAKERKCKRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFSNPITGMVEGQERVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKHEHVIYCRLSRRQRNLYEDFIASSETQATLATANFFGMISIIMQLRKVCNHPDLFEGRPIISSFDMAGIDMQLSSSVCSMLSPGPLSSVDLCALGLIFTHLDFSMASWEYDEVKSIATPSRLIKERSNLDNIEEVGPGSKHWKKLPGKNIFEEIRKSLLEERLREVKQRAASIAWWNSLRCQKKPIYSTTLRELLTVKHPIYDVHRHKTERLSYLYSSKLGDVILSPIERFQKMTDLVESFMFAIPAARTPVPVFWCSQIRTPVFLHSTYEEKCSEMLLPLLSPIRPAIVRRQLYFPDRRLIQFDCGKLQELAILLRKLKSEGHRVLIFTQMTKMLDILEVFMNLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFIFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLNPMELFSGHKTLQIKNMQREKNHNNGNEVSLSNADVDAALKYAEDEADYMALKKVEQEEAVDNQEFTEEAIGRLEDDEFVNDDDMKADEPTDHEMTTYSKDGAVNLKENGCIEERAVTLTGNEDVDMLADVKQMAAAAAAAGQAISSFENQLRPIDRYAVRFLELWDPIIDKAALESQVGFEETEWELDRIEKYKEEMEAEIDDDEEPLVYERWDADFATEAYRQEVEALTQHQLLEEQEAEANEKEGADDGHLDAMVYKMPRNPKLKSKKKPKKAKFKSLKKESLTSELKHVKEEVSMETLSVDDDDDGTYSDTMSPCSSMWRKRKKAESAICIDKTRSKKTKKFKKGPETCTFSVDSDLSGKQHDRFTELKPYEVVVSDIEQKPASRSKMGGKISISTMPVKRVLMIKPEKLKKGNVWLKDCVPPPALWMPQEDAVLCAVVHEYGPHWSLVSEILYGMTAGGFYRGRYRHPVHCCERFRELIHRYVLFSPENPINNEKMSNMVPGKALLKVTEDNIRMLLNVVAEQPDHELLLQKHFTALLSSVWRVKSRVENQQNMPSSRNALYNSGRVFNSSVNPLPWNSLRESAKRMKFTNLGQSTKLLAAALHDASSRRPGDRVSNSNVNEEAPAVGEKLEITLEFQKEENDYLIPFPPVISLSIPGSAPWMSVNKDRAAAHHLRASTSIAENRFRDAARASSSVLPANDLKLWLASKTQSLGKHKLTVSESTKPPRSKTRKTLLEQNEGHAEPVMQPLSDRDPNLRFDLPPEVIQDDKDGFSISFMEKELSVETKISEAVPHIYVPDLILGLDDYSLLPEYTDIG |